miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|90039833|gb|CT581560.1|CT581560 AATTCGGCACGAGGTATGTACTTTTCTAGATCAAATTCCTGCAATCATTATCAAATTTGTTCTCAATTCACTCTTCTATT
TTGTTTAATTTGGAAGATATTAGAGAGCAGGAAGATTGAGAAGTTACGTTGTTCATGTATTTATCTACCAGCTTGGGTAC
ATCAGAAATCTTGAATCTTCCGAAGGGTGCAAGTTTGAGCTTTCGCCCATCATGAAGCTCCAACGGACTGAAACACATTT
TCTTATCAAGCTCATCTAAACCCAATATCACTGTTTTTCCCCATACCGGGTGAGAGCATTGAAGTGCGCAGAGCATAAGT
TCGACTCTTTTAACGCATTCGTAGCTTGAATCTACTCCCCCTTCAGTCATCTCTGTAATCACCTCTTGAATGGGTTTATC
CAAATCGGATGGATTAAGAAACTCAGTGACCCCAAATCGTTTAGATATTTCTTCTTTTCGTGGGTCGATGTCAATTCCAA
GGATTCTGGAAGCTCCAGCTATTCGAGCCCCTTCTGCAACAGCCAAGCCAATGGTGCCCAATCCAAAGATGGCTACCGAA
TCACCGGGCTTCACCTTCCCAGCGTTCCAGGCTGCTCCT




Most similar to sp|Q96533|ADHX_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q96533|ADHX_ARATH Alcohol dehydrogenase class-3 OS=Arabidopsis
           thaliana GN=ADH2 PE=1 SV=2
          Length = 379

 Score =  181 bits (460), Expect = 2e-45
 Identities = 90/157 (57%), Positives = 115/157 (73%), Gaps = 1/157 (0%)
 Frame = -2

Query: 598 GAAWNAGKVKPGDSVAIFGLGTIGLAVAEGARIAGASRILGIDIDPRKEEISKRFGVTEF 419
           GA WN  KV+PG +VAIFGLGT+GLAVAEGA+ AGASRI+GIDID +K E +K+FGV EF
Sbjct: 184 GAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEF 243

Query: 418 LNPSDLDKPIQEVITEMTEGGVDSSYECVKRVELMLCALQCSHPVWGKTVILGLDELDKK 239
           +NP D DKPIQEVI ++T+GGVD S+EC+  V +M  AL+C H  WG +VI+G+    ++
Sbjct: 244 VNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE 303

Query: 238 MCFSPLELHDGRKLKLAPFGRFKI-SDVPKLVDKYMN 131
           +   P +L  GR  K   FG FK  + VP LV+KYMN
Sbjct: 304 ISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMN 340